Ornolfsdottir EBPinckney JLTester PAJournal of Phycology2010-02-152010-02-152003 Aprhttp://hdl.handle.net/1969.3/23427449-457Diagnostic photopigment analysis is a useful tool for determining the presence and relative abundance of algal groups in natural phytoplankton assemblages. This approach is especially useful when a genus has a unique photopigment composition. The toxic dinoflagellate Karenia brevis (Davis) G. Hansen & Moestrup comb. nov. shares the diagnostic pigment gyroxanthin-diester with only a few other dinoflagellates and lacks peridinin, one of the major diagnostic pigments of most dinoflagellate species. In this study, measurements of gyroxanthin-diester and other diagnostic pigments of K. brevis were incorporated into the initial pigment ratio matrix of the chemical taxonomy program (CHEMTAX) to resolve the relative contribution of K. brevis biomass in mixed estuarine phytoplankton assemblages from Florida and Galveston Bay, Texas. The phytoplankton community composition of the bloom in Galveston Bay was calculated based on cell enumerations and biovolumetric measurements in addition to chl a -specific photopigment estimates of biomass (HPLC and CHEMTAX). The CHEMTAX and biovolume estimates of the phytoplankton community structure were not significantly different and suggest that the HPLC-CHEMTAX approach provides reasonable estimates of K. brevis biomass in natural assemblages. The gyroxanthin-diester content per cell of K. brevis from Galveston Bay was significantly higher than in K. brevis collected from the west coast of Florida. This pigment-based approach provides a useful tool for resolving spatiotemporal distributions of phytoplankton in the presence of K. brevis blooms, when an appropriate initial ratio matrix is appliedCHEMTAXGALVESTON BAYHPLCKarenia brevisphotopigment biomarkersred tideRED-TIDE DINOFLAGELLATEPERFORMANCE LIQUID-CHROMATOGRAPHYPHYTOPLANKTON COMMUNITY-STRUCTUREWESTERN EQUATORIAL PACIFICALGAL CLASS ABUNDANCESGYMNODINIUM-BREVEPIGMENT ANALYSISPHOTOSYNTHETIC PIGMENTSGYRODINIUM-AUREOLUMCAROTENOID-PIGMENTSJournal